The upgrading cube recipes are:
Uniques:
1 Ral Rune + 1 Sol Rune + 1 Perfect Emerald + Normal Unique Weapon = Exceptional Version of Weapon
1 Tal Rune + 1 Shael Rune + 1 Perfect Diamond + Normal Unique Armor = Exceptional Version of Armor
1 Lum Rune + 1 Pul Rune + 1 Perfect Emerald + Exceptional Unique Weapon = Elite Version of Weapon (Ladder Only)
1 Ko Rune + 1 Lem Rune + 1 Perfect Diamond + Exceptional Unique Armor = Elite Version of Armor (Ladder Only)
Rares:
1 Ort Rune + 1 Amn Rune + 1 Perfect Sapphire + Normal Rare Weapon = Exceptional Rare Weapon
1 Ral Rune + 1 Thul Rune + 1 Perfect Amethyst + Normal Rare Armor = Exceptional Rare Armor
1 Fal Rune + 1 Um Rune + 1 Perfect Sapphire + Exceptional Rare Weapon = Elite Rare Weapon
1 Ko Rune + 1 Pul Rune + 1 Perfect Amethyst + Exceptional Rare Armor = Elite Rare Armor
Socketing:
Hel+Scroll of TP+Item=Cleaned Sockets
1 Tal Rune + 1 Thul Rune + 1 Perfect Topaz + Normal Body Armor = Socketed Body Armor of same type
1 Ral Rune + 1 Amn Rune + 1 Perfect Amethyst + Normal Weapon = Socketed Weapon of same type
1 Ral Rune + 1 Thul Rune + 1 Perfect Sapphire + Normal Helm = Socketed Helm of same type
1 Tal Rune + 1 Amn Rune + 1 Perfect Ruby + Normal Shield = Socketed Shield of same type
Upped Tgods: 213
Double Upped Bloodfist: 88
Double Upped Magefist: 98
Double Upped Frostburns: 115
Upped Gores: 213
Double Upped Chance: 102
Double Upped Goldwrap: 130
Upped Infernostrides: 170
Double Upped Hotspur: 80
Double Upped Gorefoot: 96
Double Upped Goblintoe: 123
Double Upped Tearhaunch: 162
Upped Crown of Theives: 495, Eth: 741
Upped Gaze: 314
Upped Waterwalks: 201
Upped Silkweaves: 204
Upped Wartravlers: 197
Upped String: 306
Upped Snowclash: 282
Upped Arreats: 504, Eth: 756
Upped Vipermagi: 1034
Upped Homo: 444, Eth: 666
Upped HOZ: 579, Eth: 867
Upped Toothrow: 1735, Eth: 2,568
Upped Shaftop: 2422
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Faster Hit Recovery
Sorc 5 / 9 / 14 / 20 / 30 / 42 / 60 / 86 / 142 /280
Paladin 7 / 15 / 27 / 48 / 86 / 200
Nec 5 / 10 / 16 / 26 / 39 / 56 / 86 / 152
Druid 3 / 7 / 13 / 19 / 29 / 42 / 63 / 99 / 174
Barb 7 / 15 / 27 / 48 / 86 / 200
Zon 6 / 13 / 20 / 32 / 53 / 86 / 174
Assassin 7 / 15 / 27 / 48 / 86 / 200
Faster Cast Rate
Sorc 9 / 20 / 37 / 63 / 105 / 200
Paladin 9 / 18 / 30 / 48 / 75 / 125
Nec 9 / 18 / 30 / 48 / 75 / 125
Druid 4 / 10 / 19 / 30 / 46 / 68 / 99 / 163
Barb 9 / 20 / 37 / 63 / 105 / 200
Zon 7 / 14 / 22 / 32 / 48 / 68 / 99 / 152
Assassin 8 / 16 / 27 / 42 / 65 / 102 / 174
RUNEWORDS
Fury ........3 Socket Melee Weapons .....Jah + Gul + Eth
Honor ......5 Socket Melee Weapons .....Amn + El + Ith + Tir + Sol
Memory ....4 Socket Staves (Not Orbs).. Lum + Io + Sol + Eth
Rhyme .....2 Socket Shields ............... Shael + Eth
White ......2 Socket Wand .................Dol + Io
1.10 Runewords
Beast .....................5 Socket Axes/Scepters/Hammers.... Ber + Tir + Um + Mal + Lum
Bramble.................. 4 Socket Body Armor ....................Ral + Ohm + Sur + Eth
Breath of the Dying ....6 Socket Weapons ......................Vex + Hel + El + Eld + Zod + Eth
Call To Arms*............5 Socket Weapons ......................Amn + Ral + Mal + Ist + Ohm
Chaos.....................3 Socket Claws ..........................Fal + Ohm + Um
Chains of Honor.........4 Socket Body Armor ...................Dol + Um + Ber + Ist
Delirium*..................3 Socket Helms..........................Lem + Ist + Io
Enigma....................3 Socket Body Armor...................Jah + Ith + Ber
Exile.......................4 Socket Paladin Shields (only)........Vex + Ohm + Ist + Dol
Hand of Justice..........4 Socket Weapons......................Sur + Cham + Amn + Lo
Heart of the Oak*.......4 Socket Staves/Maces* ..............Ko + Vex + Pul + Thul
Sanctuary................3 Socket Shields.........................Ko + Ko + Mal
1.10 Ladder Only Runewords
Brand............4 Socket Missile Weapons..............Jah + Lo + Mal + Gul
Death............5 Socket Swords/Axes..................Hel + El + Vex + Ort + Gul
Destruction.....5 Socket Polearms/Swords..............Vex + Lo + Ber + Jah + Ko
Dragon..........3 Socket Body Armor/Shields...........Sur + Lo + Sol
Dream...........3 Socket Helms/Shields..................Io + Jah + Pul
Faith.............4 Socket Missile Weapons..............Ohm + Jah + Lem + Eld
Fortitude........4 Socket Weapons/Body Armor........El + Sol + Dol + Lo
Grief .............5 Socket Swords/Axes..................Eth + Tir + Lo + Mal + Ral
Ice...............4 Socket Missile Weapons...............Amn + Shael + Jah + Lo
Infinity..........4 Socket Polearms........................Ber + Mal + Ber + Ist
Insight..........4 Socket Polearms/Staves...............Ral + Tir + Tal + Sol
Last Wish.......6 Socket Swords/Hammers/Axes.......Jah + Mal + Jah + Sur + Jah + Ber
Oath............4 Socket Swords/Axes/Maces...........Shael + Pul + Mal + Lum
Phoenix........4 Socket Weapons/Shields...............Vex + Vex + Lo + Jah
Pride............4 Socket Polearms........................Cham + Sur + Io + Lo
Spirit............4 Socket Swords/Shields.................Tal + Thul + Ort +Amn