For me, it would be
#1 Vagabond
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Based on the book "Musashi" by Eiji Yoshikawa, Vagabond is a fictional retelling of the life of Miyamoto Mushashi, often referred to as the "Sword Saint" - perhaps the most famous and successful of Japan's sword fighters.
#2 Abara
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The story revolves around creatures known as Gaunas, those who can shape bone like armor and weaponry around themselves by transforming. The transformation begins around the spine and then shapes layered armor. The story focuses on one such Gauna known as Kudou Denji, though he uses Itou Denji as a fake name earlier.
#3 Tokyo Akazukin
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Tokyo Red Hood is about an eleven year old girl who usually just goes by the name of Akazukin (Little Red Riding Hood). She has a sick obsession with a being known only as Mr. Wolf and wants nothing more than to be eaten by him to end her "immortal" life. Akazukin has lost all of her memories and doesn't even know who she really is. Her reason to want to be eaten by Mr. Wolf is not even known to her, instead it's a desire that is locked deep within her consciousness.
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What would yours be?