Pictures?
If you want a structural fix, which being a unibody, this would require welding.
Chances are, if you just gob bondo, foam, or kitty hair fiberglass in there the rust will only continue. Two of those three products are hydroscopic, so they will retain water, and actually assist in rusting the car faster. But it may look better - temporarily.
If you aren't going to cut out the rust and weld in patch panels, you're wasting your resources.
My humble .02 from a fellow New Yorker.